PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cucsa.352410.1
Common NameWRKY33
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family WRKY
Protein Properties Length: 393aa    MW: 42490.7 Da    PI: 10.1851
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cucsa.352410.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.91.4e-30321378359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYe++Hnh 
  Cucsa.352410.1 321 DDYSWRKYGQKPIKGSPHPRGYYKCSSLrGCPARKHVERALDDPTMLIVTYENDHNHA 378
                     99************************998****************************6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105334.1E-17271317IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.9E-32308378IPR003657WRKY domain
PROSITE profilePS5081129.585314380IPR003657WRKY domain
SuperFamilySSF1182903.53E-26317378IPR003657WRKY domain
SMARTSM007743.1E-36319379IPR003657WRKY domain
PfamPF031063.6E-26321377IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    Send to blast
MLLLNNNMAV ELLVGFGDAT TSNHFTPNME ENAAVSAVQE AASAGIQSVQ NFLRLMSHTT  60
NHQHSQHDSS TSSTPNNGYQ AVADSVVNKF KKVISLLDRN RTGHARFRRA PVLTTTTTTT  120
TTPPPPPPPK VKPQHQDPSS SSPISVPPVQ VKKQESVSAF KVYCPTPSSV VRLPPLPHNN  180
PHQPSHPSNT FQAQQNTSSV VLKNGSVDRK DATTTINFAA SPPISAANSY ISSLTGDTES  240
LQPSLSSGFQ FTHMSQVSSA GKPPLSSSSL KRKCNSMEDS AMKCGSSSGR CHCSKKSRKN  300
RIKRVIRVPA VSSKLADIPP DDYSWRKYGQ KPIKGSPHPR GYYKCSSLRG CPARKHVERA  360
LDDPTMLIVT YENDHNHAHS TETPAPLVLE SS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-20307377271WRKY transcription factor 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00450DAPTransfer from AT4G24240Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGU9840270.0GU984027.1 Cucumis sativus WRKY protein (WRKY33) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011652902.10.0PREDICTED: probable WRKY transcription factor 7-like isoform X1
SwissprotQ9STX01e-106WRKY7_ARATH; Probable WRKY transcription factor 7
TrEMBLE7CEX60.0E7CEX6_CUCSA; WRKY protein
STRINGSolyc04g078550.2.11e-139(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21773486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.11e-84WRKY DNA-binding protein 7
Publications ? help Back to Top
  1. Ling J, et al.
    Genome-wide analysis of WRKY gene family in Cucumis sativus.
    BMC Genomics, 2011. 12: p. 471
    [PMID:21955985]